Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809221.1_cds_XP_016495654.1_9950
CDS Infomation

[gene=LOC107814717] [db_xref=GeneID:107814717] [protein=probable pectate lyase P59] [protein_id=XP_016495654.1] [location=complement(join(1267..1488,1684..1926,2036..2687,4325..4512))] [gbkey=CDS]
Sequence

ATGGAATTCACAAAGAATAATTTGTTTTTGTTTGTTATGGTTGTTCTAGTTCTTAGCATA
GAGGCACACATTGGGGAGTTTGATGAGGTGTGGCGGAAGCGAGCCGAGAAAGCAAAGAAG
GCCGCTCGCCATGCCTATCATCCTAATCCTAAGATTGTAGCCGATCATCTTAACAACCAA
GTTGACAAGGCCGTACGGGGCAGCAATAGCAGAAGAAGGGACCTGCACAGGTACAATGGT
CAATGCAAGGCGACGAACCCAATTGACCAGTGCTGGCGGTGCGATCCAAACTGGGCTCGA
AACCGCATGAAACTAGCAGATTGCGTCCTTGGCTTTGGCCGCAAGACAACCGGAGGCAAA
GGTGGAAAAATCTACGTAGTAACTGACAATTCCGACAGCGATTTAGTTAATCCCAAGCCT
GGAACTTTACGCCACGCCGTGATACAGCCGCAGCCACTTTGGATTATATTTGCCAAGAAC
ATGGTAATTAGGCTAAACGAGGAGCTTATTATGACCAGCAACAAGACAATTGACGCCCGA
GGAAAGCAAGTGCACATTGCTCATGGTGGTGGCCTTATGTTACAGTTCATACACAATGTT
ATAATTAGTAACCTTCGCATTCATGATACTAAGGCTGGTAATGGTGGCCTAATTAGAGAC
TCCGTCGACCATTACGGTTATCGAACGAAAAGTGATGGCGATGGTATTTCAATCTTTGGA
TCCACAAATGTTTGGATTGATCACGTCTCAATGTCCAATTGTCAGGATGGTCTCATTGAT
GCTGTTGAGGCTTCCACTGCCATTACTATTTCCAACAGCCATTTCACTAAACATAATGAA
GTCATGTTGTTTGGAGCCAGTGATAGCTCCTCAAGGGACTCTATTATGCAAATAACACTT
GCTTTCAATCACTTTGGACAAGGGTTGATGCAGAGGATGCCAAGAGTGAGATGGGGATTT
GTTCATGCTGTCAACAATGATTACACACATTGGCTAATGTATGCTATTGGAGGAAGCATG
CATCCTACCATACTTAGCCAGGGAAATCGTTTCATCGCTCCCCCTAATCCAAACGCCAAA
GAGGTGACAAAAAGGGATTATGCACCTGAGAGCGTGTGGAAGAATTGGGTATGGAAATCA
CAGGGAGATCTTATGATGAACGGGGCGTTCTTTGTAGAATCTGGAAATCCAAATCATGCA
TTCTTGAGGAGTCCTGATATGATCAGCTCCAAGCCAGGATCATTTGTGAGCAGCCTGACA
CGATTTTCAGGCTCTCTGAACTGCATTGAGGGGAAGCCTTGTTAG

Peptide Sequence

PEP ID

XP_016495654.1
PEP Infomation

PREDICTED: probable pectate lyase P59 [Nicotiana tabacum]
Sequence

MEFTKNNLFLFVMVVLVLSIEAHIGEFDEVWRKRAEKAKKAARHAYHPNPKIVADHLNNQ
VDKAVRGSNSRRRDLHRYNGQCKATNPIDQCWRCDPNWARNRMKLADCVLGFGRKTTGGK
GGKIYVVTDNSDSDLVNPKPGTLRHAVIQPQPLWIIFAKNMVIRLNEELIMTSNKTIDAR
GKQVHIAHGGGLMLQFIHNVIISNLRIHDTKAGNGGLIRDSVDHYGYRTKSDGDGISIFG
STNVWIDHVSMSNCQDGLIDAVEASTAITISNSHFTKHNEVMLFGASDSSSRDSIMQITL
AFNHFGQGLMQRMPRVRWGFVHAVNNDYTHWLMYAIGGSMHPTILSQGNRFIAPPNPNAK
EVTKRDYAPESVWKNWVWKSQGDLMMNGAFFVESGNPNHAFLRSPDMISSKPGSFVSSLT
RFSGSLNCIEGKPC

Transcript Sequence

Gene sequence data has not been registered.